Data Visualizations to Detect Systematic Errors in Laboratory Assay Results
Trefwoorden:
Data quality check, Data science;, R programming languageSamenvatting
The measurement of concentrations of drugs and endogenous substances is widely used in basic and clinical pharmacology research and service tasks. Using data science-derived visualizations of laboratory data, it is demonstrated on a real-life example that basic statistical exploration of laboratory assay results or advised stan- Dard visual methods of data inspection may fall short in detecting systematic labor- tory errors. For example, data pathologies such as generating always the same value in all probes of a particular assay run may pass undetected when using standard methods of data quality check. It is shown that the
use of different data visualiza- tions that emphasize different views of the data may enhance the detection of sys- tematic laboratory errors. A dotplot of single data in the order of assay is proposed that provides an overview on the data range, outliers and a particular type of sys- tematic errors where similar values are wrongly measured in all probes